getm_pub.bib

@article{burchard2019mef,
  title = {{Mixing estimates for estuaries}},
  author = {Burchard, Hans and Lange, Xaver and Klingbeil, Knut and MacCready, Parker},
  journal = {Journal of Physical Oceanography},
  year = {2019},
  pages = {631--648},
  volume = {49},
  doi = {10.1175/JPO-D-18-0147.1}
}
@article{graewe2019dms,
  title = {{Decomposing mean sea level rise in a semi-enclosed basin, the Baltic Sea}},
  author = {Gr\"awe, Ulf and Klingbeil, Knut and Kelln, Jessica and Dangendorf, S\"onke},
  journal = {Journal of Climate},
  year = {2019},
  doi = {10.1175/JCLI-D-18-0174.1}
}
@article{lange2019tri,
  title = {{The relative importance of wind straining and gravitational forcing
            in driving exchange flows in tidally energetic estuaries}},
  author = {Lange, Xaver and Burchard, Hans},
  journal = {Journal of Physical Oceanography},
  year = {2019},
  pages = {723--736},
  volume = {49},
  doi = {10.1175/JPO-D-18-0014.1}
}
@article{lemarie2019adc,
  title = {{Advancing dynamical cores of oceanic models across all scales}},
  author = {Lemari\'e, Florian and Burchard, Hans and Debreu, Laurent and Klingbeil, Knut and Sainte-Marie, Jacques},
  journal = {{BAMS}},
  year = {2019},
  doi = {10.1175/BAMS-D-18-0303.1}
}
@article{becherer2018wadden,
  title = {{The Wadden Sea in transition - consequences of sea level rise}},
  author = {Becherer, Johannes and Hofstede, Jacobus L. A. and Gr{\"a}we, Ulf and
          Purkiani, Kaveh and Schulz, Elisabeth and Burchard, Hans},
  journal = {Ocean Dynamics},
  year = {2018},
  volume = {68},
  pages = {131--151},
  doi = {10.1007/s10236-017-1117-5}
}
@article{burchard2018kta,
  title = {{The Knudsen theorem and the Total Exchange Flow analysis framework applied to the Baltic Sea}},
  author = {Burchard, Hans and Bolding, Karsten and Feistel, Rainer and Gr\"awe, Ulf and Klingbeil, Knut and MacCready, Parker and Mohrholz, Volker and Umlauf, Lars and van der Lee, Eefke M.},
  journal = {Progress in Oceanography},
  year = {2018},
  pages = {268--286},
  volume = {165},
  doi = {10.1016/j.pocean.2018.04.004}
}
@article{frassl2018oal,
  title = {{Opportunities and Limits of Using Meteorological Reanalysis Data for Simulating Seasonal to Sub-Daily Water Temperature Dynamics in a Large Shallow Lake}},
  author = {Frassl, Marieke and Boehrer, Bertram and Holtermann, Peter Ludwig and Hu, Weiping and Klingbeil, Knut and Peng, Zhaoliang and Zhu, Jinge and Rinke, Karsten},
  journal = {Water},
  year = {2018},
  number = {594},
  volume = {10},
  doi = {10.3390/w10050594}
}
@article{hofstede2018wadden,
  title = {{Are Wadden Sea tidal systems with a higher tidal range more resilient
         against sea level rise?}},
  author = {Hofstede, Jacobus L. A. and Becherer, Johannes and Burchard, Hans},
  journal = {Journal of coastal conservation},
  volume = {22},
  pages = {71--78},
  year = {2018},
  doi = {10.1007/s11852-016-0469-1}
}
@article{kerimoglu2018mbp,
  title = {A model-based projection of historical state of a coastal ecosystem: Relevance of phytoplankton stoichiometry},
  author = {Onur Kerimoglu and Fabian Gro{\ss}e and Markus Kreus and Hermann-J. Lenhart and Justus E.E. van Beusekom},
  journal = {Science of The Total Environment},
  volume = {639},
  pages = {1311--1323},
  year = {2018},
  doi = {10.1016/j.scitotenv.2018.05.215}
}
@article{klingbeil2018noh,
  title = {{The numerics of hydrostatic structured-grid coastal ocean models: state of the art and future perspectives}},
  author = {Klingbeil, Knut and Lemari\'e, Florian and Debreu, Laurent and Burchard, Hans},
  journal = {Ocean Modelling},
  year = {2018},
  pages = {80--105},
  volume = {125},
  doi = {10.1016/j.ocemod.2018.01.007}
}
@article{lemmen2018msf,
  title = {{Modular System for Shelves and Coasts (MOSSCO v1.0) -- a flexible and multi-component framework for coupled coastal ocean ecosystem modelling}},
  author = {Lemmen, Carsten and Hofmeister, Richard and Klingbeil, Knut and Nasermoaddeli, M. Hassan and Kerimoglu, Onur and Burchard, Hans and K\"osters, Frank and Wirtz, Kai W.},
  journal = {Geoscientific Model Development},
  year = {2018},
  pages = {915--935},
  volume = {11},
  doi = {10.5194/gmd-11-915-2018}
}
@article{nasermoaddeli2018mso,
  title = {{A model study on the large-scale effect of macrofauna on the suspended sediment concentration in a shallow shelf sea}},
  author = {Nasermoaddeli, M. Hassan and Lemmen, Carsten and Stigge, G. and Kerimoglu, Onur and Burchard, Hans and Klingbeil, Knut and Hofmeister, Richard and Kreus, Markus and Wirtz, Kai W. and K\"osters, Frank},
  journal = {Estuarine, Coastal and Shelf Science},
  year = {2018},
  pages = {62--76},
  volume = {211},
  doi = {10.1016/j.ecss.2017.11.002}
}
@article{slavik2018lsi,
  title = {{The large-scale impact of offshore wind farm structures on pelagic primary productivity in the southern North Sea}},
  author = {Slavik, Kaela and Lemmen, Carsten and Zhang, Wenyan and Kerimoglu, Onur and Klingbeil, Knut and Wirtz, Kai W.},
  journal = {Hydrobiologia},
  year = {2018},
  doi = {10.1007/s10750-018-3653-5}
}
@article{zhurbas_etal_2018,
  author = {Zhurbas, Victor and V\"ali, Germo and Golenko, Maria and Paka, Vadim},
  title = {{Variability of bottom friction velocity along the inflow water pathway in the Baltic Sea}},
  journal = {Journal of Marine Systems},
  volume = {184},
  pages = {50--58},
  year = {2018},
  doi = {10.1016/j.jmarsys.2018.04.008}
}
@article{patsch2017evaluation,
  title = {{An evaluation of the North Sea circulation in global and regional
          models relevant for ecosystem simulations}},
  author = {P{\"a}tsch, Johannes and Burchard, Hans and Dieterich, Christian and
          Gr{\"a}we, Ulf and Gr{\"o}ger, Matthias and Mathis, Moritz and
          Kapitza, Hartmut and Bersch, Manfred and Moll, Andreas and Pohlmann,
          Thomas and Jian Su and Ha T. M. Ho-Hagemann and Achim Schulz and
          Alberto Elizalde and Carsten Eden},
  journal = {Ocean Modelling},
  volume = {116},
  pages = {70--95},
  year = {2017},
  doi = {10.1016/j.ocemod.2017.06.005}
}
@article{kerimoglu2017abm,
  title = {The acclimative biogeochemical model of the southern North Sea},
  author = {Kerimoglu, O. and Hofmeister, R. and Maerz, J. and Riethm\"uller, R. and Wirtz, K. W.},
  journal = {Biogeosciences},
  volume = {14},
  year = {2017},
  number = {19},
  pages = {4499--4531},
  doi = {10.5194/bg-14-4499-2017}
}
@article{sildever_etal_2017,
  author = {Sildever, Sirje and Kremp, Anke and Enke, Annely and Buschmann, Fred and Maljutenko, Ilja and Lips, Inga},
  doi = {10.1016/j.csr.2016.11.012},
  issn = {02784343},
  journal = {Continental Shelf Research},
  pages = {46--55},
  title = {{Spring bloom dinoflagellate cyst dynamics in three eastern sub-basins of the Baltic Sea}},
  url = {http://www.sciencedirect.com/science/article/pii/S0278434316303144},
  volume = {137},
  year = {2017}
}
@article{buchmann_and_soderkvist_2016,
  author = {Bjarne B\"uchmann and Johan S\"oderkvist},
  title = {{Internal variability of a 3-D ocean model}},
  journal = {Tellus A},
  volume = {68},
  year = {2016},
  url = {http://dx.doi.org/10.3402/tellusa.v68.30417},
  doi = {10.3402/tellusa.v68.30417}
}
@article{graewe_etal_2016,
  title = {{A numerical model for the entire Wadden Sea: Skill assessment and analysis of hydrodynamics}},
  author = {Gr\"awe, Ulf and Fl\"oser, G\"otz and Gerkema, Theo and Duran-Matute, Matias and Badewien, Thomas H. and Schulz, Elisabeth and Burchard, Hans},
  journal = {Journal of Geophysical Research: Oceans},
  year = {2016},
  pages = {5231--5251},
  volume = {121},
  doi = {10.1002/2016JC011655}
}
@article{liquete_etal_2016,
  author = {Liquete, Camino and Piroddi, Chiara and Mac{\'i}as, Diego and Druon, Jean-No{\"e}l and Zulian, Grazia},
  title = {Ecosystem services sustainability in the Mediterranean Sea: assessment of status and trends using multiple modelling approaches},
  journal = {Scientific Reports},
  year = {2016},
  publisher = {The Author(s)},
  volume = {6},
  pages = {34162},
  note = {Article},
  url = {http://dx.doi.org/10.1038/srep34162},
  doi = {10.1038/srep34162}
}
@article{marcias_etal_2016,
  author = {Diego Macias and Elisa Garcia-Gorriz and Adolf Stips},
  title = {The seasonal cycle of the Atlantic Jet dynamics in the Alboran Sea: direct atmospheric forcing versus Mediterranean thermohaline circulation},
  journal = {Ocean Dynamics},
  volume = {},
  pages = {},
  year = {2016},
  doi = {10.1007/s10236-015-0914-y}
}
@article{purkiani2016wiv,
  title = {{Wind-induced variability of estuarine circulation in a tidally energetic inlet with curvature}},
  author = {Purkiani, Kaveh and Becherer, Johannes and Klingbeil, Knut and Burchard, Hans},
  journal = {Journal of Geophysical Research: Oceans},
  year = {2016},
  pages = {1--17},
  volume = {121},
  doi = {10.1002/2015JC010945}
}
@article{schwemmer_etal_2016,
  author = {Schwemmer, P. and G\"upner, F. and Adler, S. and Klingbeil, K. and Garthe, S.},
  title = {{Modelling small-scale foraging habitat use in breeding Eurasian oystercatchers (\textit{Haematopus ostralegus}) in relation to prey distribution and environmental predictors}},
  journal = {Ecological Modelling},
  year = {2016},
  pages = {322--333},
  volume = {320},
  doi = {10.1016/j.ecolmodel.2015.10.023},
  publisher = {Elsevier},
  url = {http://dx.doi.org/10.1016/j.ecolmodel.2015.10.023}
}
@article{soosaar_etal_2016,
  author = {Soosaar, Edith and Maljutenko, Ilja and Uiboupin, Rivo and Skudra, Maris and Raudsepp, Urmas},
  doi = {10.5194/os-12-417-2016},
  issn = {1812-0792},
  journal = {Ocean Science},
  number = {2},
  pages = {417--432},
  title = {{River bulge evolution and dynamics in a non-tidal sea – Daugava River plume in the Gulf of Riga, Baltic Sea}},
  url = {http://www.ocean-sci.net/12/417/2016/},
  volume = {12},
  year = {2016}
}
@article{stanev_etal_2016,
  author = {Stanev, E. V. and Schulz-Stellenfleth, J. and Staneva, J. and Grayek, S. and Grashorn, S. and Behrens, A. and Koch, W. and Pein, J.},
  title = {{Ocean forecasting for the German Bight: from regional to coastal scales}},
  journal = {Ocean Science},
  volume = {12},
  year = {2016},
  number = {5},
  pages = {1105--1136},
  doi = {10.5194/os-12-1105-2016}
}
@article{staneva_etal_2016a,
  author = {Staneva, J. and Wahle, K. and G\"unther, H. and Stanev, E.},
  title = {Coupling of wave and circulation models in coastal--ocean predicting systems: a case study for the {G}erman {B}ight},
  journal = {Ocean Science},
  volume = {12},
  year = {2016},
  number = {3},
  pages = {797--806},
  doi = {10.5194/os-12-797-2016}
}
@article{staneva_etal_2016b,
  author = {Staneva, J. and Wahle, K. and Koch, W. and Behrens, A. and Fenoglio-Marc, L. and Stanev, E. V.},
  title = {Coastal flooding: impact of waves on storm surge during extremes -- a case study for the {G}erman {B}ight},
  journal = {Natural Hazards and Earth System Sciences},
  volume = {16},
  year = {2016},
  number = {11},
  pages = {2373--2389},
  doi = {10.5194/nhess-16-2373-2016}
}
@article{burchard_and_badewien_2015,
  author = {Burchard, Hans and Badewien, T. H.},
  title = {{Thermohaline residual circulation of the Wadden Sea}},
  journal = {Ocean Dynamics},
  volume = {65},
  pages = {1717--1730},
  year = {2015},
  doi = {10.1007/s10236-015-0895-x}
}
@article{duran_and_gerkema_2015,
  author = {Duran-Matute, Matias and Gerkema, Theo},
  title = {Calculating residual flows through a multiple-inlet system: the conundrum of the tidal period},
  journal = {Ocean Dynamics},
  volume = {65},
  pages = {1461--1475},
  year = {2015},
  publisher = {Springer},
  doi = {10.1007/s10236-015-0875-1}
}
@article{graewe_etal_2015b,
  author = {Gr\"awe, Ulf and Burchard, Hans and Naumann, M. and Mohrholz, Volker},
  title = {{Anatomizing one of the largest saltwater inflows into the Baltic Sea in December 2014}},
  journal = {Journal of Geophysical Research: Oceans},
  volume = {120},
  pages = {7676--7697},
  year = {2015},
  doi = {10.1002/2015JC011269}
}
@article{graewe_etal_2015,
  author = {Ulf Gr{\"a}we and Peter Holtermann and Knut Klingbeil and Hans Burchard},
  title = {Advantages of vertically adaptive coordinates in numerical models of stratified shelf seas},
  journal = {Ocean Modelling},
  volume = {92},
  pages = {56--68},
  year = {2015},
  doi = {10.1016/j.ocemod.2015.05.008}
}
@article{hetzel_etal_2015,
  author = {Yasha Hetzel and Charitha Pattiaratchi and Ryan Lowe and Richard Hofmeister},
  title = {Wind and tidal mixing controls on stratification and dense water outflows in a large hypersaline bay},
  journal = {Journal of Geophysical Research: Oceans},
  volume = {120},
  pages = {6034--6056},
  year = {2015},
  doi = {10.1002/2015JC010733}
}
@article{kourafalou_etal_2015,
  author = {V.H. Kourafalou and P. De Mey and J. Staneva and N. Ayoub and A. Barth and Y. Chao and M. Cirano and J. Fiechter and M. Herzfeld and A. Kurapov and A.M. Moore and P. Oddo and J. Pullen and A. van der Westhuysen and R.H. Weisberg},
  title = {Coastal Ocean Forecasting: science foundation and user benefits},
  journal = {Journal of Operational Oceanography},
  volume = {8},
  number = {sup1},
  pages = {s147-s167},
  year = {2015},
  doi = {10.1080/1755876X.2015.1022348}
}
@article{macias_etal_2015,
  author = {Diego Macias and Elisa Garcia-Gorriz and Adolf Stips},
  title = {Productivity changes in the Mediterranean Sea for the twenty-first 
              century in response to changes in the regional atmospheric forcing.
             },
  journal = {Frontiers in Marine Science},
  volume = {2},
  year = {2015},
  doi = {10.3389/fmars.2015.00079}
}
@article{mohammadi_etal_2015,
  author = {Mahdi Mohammadi-Aragh and Knut Klingbeil and Nils Br{\"u}ggemann and Carsten Eden and Hans Burchard},
  title = {The impact of advection schemes on lateral shear and baroclinic instabilities},
  journal = {Ocean Modelling},
  volume = {94},
  pages = {112--127},
  year = {2015},
  doi = {10.1016/j.ocemod.2015.07.021}
}
@article{mohrholz_etal_2015,
  author = {V. Mohrholz and M. Naumann and G. Nausch and S. Kr{\"u}ger and U. Gr{\"a}we},
  title = {Fresh oxygen for the Baltic Sea --- An exceptional saline inflow after a decade of stagnation},
  journal = {Journal of Marine Systems},
  volume = {148},
  pages = {152--166},
  year = {2015},
  doi = {10.1016/j.jmarsys.2015.03.005}
}
@article{purkiani_etal_2015,
  author = {K. Purkiani and J. Becherer and G. Fl\"osser and U. Gr{\"a}we and V. Mohrholz and H. M. Schuttelaars and H. Burchard},
  title = {Numerical analysis of stratification and de-stratification processes in a tidally energetic inlet with an ebb tidal delta},
  journal = {Journal of Geophysical Research: Oceans},
  volume = {120},
  pages = {225--243},
  year = {2015},
  doi = {10.1002/2014JC010325}
}
@article{sassi_etal_2015,
  author = {Sassi, M. G. and Duran-Matute, Matias and van Kessel, T. and Gerkema, Theo},
  title = {Variability of residual fluxes of suspended sediment in a multiple-inlet system: the Dutch Wadden Sea},
  journal = {Ocean Dynamics},
  volume = {65},
  pages = {1321--1333},
  year = {2015},
  doi = {10.1007/s10236-015-0866-2}
}
@article{schulz_etal_2015,
  author = {E. Schulz and H. M. Schuttelaars and U. Gr{\"a}we and H. Burchard},
  title = {Impact of the depth-to-width ratio of a tidally energetic estuary on the residual along-channel circulation},
  journal = {Journal of Physical Oceanography},
  volume = {45},
  pages = {2048--2069},
  year = {2015},
  doi = {10.1175/JPO-D-14-0084.1}
}
@article{stanev_etal_2015,
  author = {Stanev, Emil V. and Al-Nadhairi, Rahma and Valle-Levinson, Arnoldo},
  title = {The role of density gradients on tidal asymmetries in the German Bight},
  journal = {Ocean Dynamics},
  year = {2015},
  volume = {65},
  number = {1},
  pages = {77--92},
  issn = {1616-7228},
  doi = {10.1007/s10236-014-0784-8}
}
@article{tett_etal_2013,
  author = {Tett, Paul and Gowen, R. J. and Painting, S. J. and Elliott, Mike and Forster, Rodney and Mills, D. K. and Bresnan, Eileen and Capuzzo, Elisa and Fernandes, Teresa and Foden, J. and others},
  title = {Framework for understanding marine ecosystem health},
  journal = {Marine Ecology Progress Series},
  volume = {494},
  pages = {1--27},
  year = {2013},
  doi = {10.3354/meps10539}
}
@article{leeuwen_etal_2013,
  author = {van Leeuwen, Sonja M. and van der Molen, Johan and Ruardij, Piet and Fernand, Liam and Jickells, Tim},
  title = {Modelling the contribution of deep chlorophyll maxima to annual primary production in the {N}orth {S}ea},
  journal = {Biogeochemistry},
  volume = {113},
  pages = {137--152},
  year = {2013},
  publisher = {Springer},
  doi = {10.1007/s10533-012-9704-5}
}
@article{lenhart_etal_2010,
  author = {Lenhart, Hermann-J. and Mills, David K. and Baretta-Bekker, Hanneke and Van Leeuwen, Sonja M. and Van Der Molen, Johan and Baretta, Job W. and Blaas, Meinte and Desmit, Xavier and K{\"u}hn, Wilfried and Lacroix, Genevi{\`e}ve and others},
  title = {Predicting the consequences of nutrient reduction on the eutrophication status of the North Sea},
  journal = {Journal of Marine Systems},
  volume = {81},
  pages = {148--170},
  year = {2010},
  doi = {10.1016/j.jmarsys.2009.12.014}
}
@article{burchard_etal_2014b,
  author = {Hans Burchard and Ulf Gr\"awe and Peter L. Holtermann and Knut Klingbeil and Lars Umlauf},
  title = {Turbulence closure modelling in coastal waters},
  journal = {Die K{\"u}ste},
  volume = {81},
  pages = {69--87},
  year = {2014}
}
@article{burchard_etal_2014a,
  author = {H. Burchard and E. Schulz and H. M. Schuttelaars},
  title = {Impact of estuarine convergence on residual circulation in tidally energetic estuaries and inlets},
  journal = {Geophysical Research Letters},
  volume = {41},
  pages = {913--919},
  year = {2014},
  doi = {10.1002/2013GL058494}
}
@article{djoumna2014sot,
  author = {G. Djoumna and K. G. Lamb and Yerubandi R. Rao},
  title = {Sensitivity of the Parameterizations of Vertical Mixing and Radiative Heat Fluxes on the Seasonal Evolution of the Thermal Structure of Lake Erie},
  journal = {Atmosphere-Ocean},
  volume = {52},
  number = {4},
  pages = {294--313},
  year = {2014},
  doi = {10.1080/07055900.2014.939824}
}
@article{lessin_etal_2014b,
  author = {Lessin, Gennadi and Raudsepp, Urmas and Maljutenko, Ilja and Laanemets, Jaan and Passenko, Jelena and Jaanus, Andres},
  doi = {10.1016/j.jmarsys.2013.08.006},
  issn = {09247963},
  journal = {Journal of Marine Systems},
  pages = {76--85},
  publisher = {Elsevier B.V.},
  title = {{Model study on present and future eutrophication and nitrogen fixation in the Gulf of Finland, Baltic Sea}},
  url = {http://dx.doi.org/10.1016/j.jmarsys.2013.08.006},
  volume = {129},
  year = {2014}
}
@article{lessin_etal_2014a,
  author = {Gennadi Lessin and Urmas Raudsepp and Adolf Stips},
  title = {Modelling the Influence of {M}ajor {B}altic {In}flows on 
              {N}ear-{B}ottom {C}onditions at the {E}ntrance of the {G}ulf 
              of {F}inland},
  journal = {PLoS ONE},
  year = {2014},
  doi = {10.1371/journal.pone.0112881}
}
@article{macias_etal_2014b,
  author = {Diego Macias and Elisa Garcia-Gorriz and Chiara Piroddi and 
              Adolf Stips},
  title = {Biogeochemical control of marine productivity in the 
               {M}editerranean {S}ea during the last 50 years},
  journal = {Global Biogeochem. Cycles},
  year = {2014},
  volume = {10},
  pages = {897--907},
  doi = {10.1002/2014GB004846}
}
@article{duran_matute_etal_2014,
  author = {Matias Duran-Matute and Theo Gerkema and Gerben J. {de Boer} and Janine J. Nauw and Ulf Gr\"awe},
  title = {Residual circulation and freshwater transport in the Dutch Wadden Sea: a numerical modelling study},
  journal = {Ocean Science},
  volume = {10},
  year = {2014},
  number = {4},
  pages = {611--632},
  url = {http://www.ocean-sci.net/10/611/2014/},
  doi = {10.5194/os-10-611-2014}
}
@article{klingbeil_etal_2014,
  author = {Knut Klingbeil and Mahdi Mohammadi-Aragh and Ulf Gr\"awe and Hans Burchard},
  title = {Quantification of spurious dissipation and mixing -- Discrete Variance Decay in a Finite-Volume framework},
  journal = {Ocean Modelling},
  year = {2014},
  doi = {10.1016/j.ocemod.2014.06.001}
}
@article{soosaar_etal_2014,
  author = {Soosaar, Edith and Maljutenko, Ilja and Raudsepp, Urmas and Elken, J{\"{u}}ri},
  doi = {10.1016/j.csr.2014.02.009},
  issn = {02784343},
  journal = {Continental Shelf Research},
  pages = {75--84},
  publisher = {Elsevier},
  title = {{An investigation of anticyclonic circulation in the southern Gulf of Riga during the spring period}},
  url = {http://linkinghub.elsevier.com/retrieve/pii/S0278434314000636},
  volume = {78},
  year = {2014}
}
@article{stanev_etal_2014a,
  author = {Stanev, Emil V. and Al-Nadhairi, Rahma and Staneva, Joanna and Schulz-Stellenfleth, Johannes and Valle-Levinson, Arnoldo},
  title = {Tidal wave transformations in the {G}erman {B}ight},
  journal = {Ocean Dynamics},
  year = {2014},
  volume = {64},
  number = {7},
  pages = {951--968},
  doi = {10.1007/s10236-014-0733-6}
}
@article{stanev_etal_2014b,
  author = {Stanev, E. V. and He, Y. and Staneva, J. and Yakushev, E.},
  title = {Mixing in the Black Sea detected from the temporal and spatial variability of oxygen and sulfide – Argo float observations and numerical modelling},
  journal = {Biogeosciences},
  volume = {11},
  year = {2014},
  number = {20},
  pages = {5707--5732},
  doi = {10.5194/bg-11-5707-2014}
}
@article{hofmeister_etal_2013,
  author = {Richard Hofmeister and Karsten Bolding and Robert D. Hetland and Gerald Schernewski and Hans Burchard},
  title = {The dynamics of cooling water discharge in a shallow, non-tidal embayment},
  journal = {Cont. Shelf Res.},
  volume = {71},
  pages = {68-77},
  year = {2013}
}
@article{schippmann_etal_2013,
  author = {Bianca Schippmann and Gerald Schernewski and Ulf Gr\"awe and Hans Burchard and Tomasz Walczykiewicz},
  title = {A model tool for bathing water quality management: A case study on Salmonella occurrence at the southern Baltic coast},
  journal = {Ocean \& Coastal Management},
  volume = {82},
  number = {0},
  pages = {71--84},
  year = {2013},
  note = {},
  issn = {0964-5691}
}
@article{klingbeil_and_burchard_2013,
  author = {Knut Klingbeil and Hans Burchard},
  title = {Implementation of a direct nonhydrostatic pressure gradient discretisation into a layered ocean model},
  journal = {Ocean Modelling},
  volume = {65},
  pages = {64--77},
  year = {2013},
  doi = {10.1016/j.ocemod.2013.02.002}
}
@article{holtermann_etal_2014,
  author = {Holtermann, Peter L. and Burchard, Hans and Gr\"awe, Ulf and Klingbeil, Knut and Umlauf, Lars},
  title = {Deep-water dynamics and boundary mixing in a nontidal stratified basin: A modeling study of the Baltic Sea},
  journal = {Journal of Geophysical Research: Oceans},
  volume = {119},
  number = {2},
  pages = {1465--1487},
  year = {2014},
  doi = {10.1002/2013JC009483}
}
@article{graewe_etal_2013,
  year = {2013},
  issn = {1616-7341},
  journal = {Ocean Dynamics},
  volume = {63},
  number = {8},
  title = {The future of the western Baltic Sea: two possible scenarios},
  author = {Gr\"awe, Ulf and Friedland, Rene and Burchard, Hans},
  pages = {901-921},
  doi = {10.1007/s10236-013-0634-0}
}
@article{macias_etal_2013,
  author = {Diego Macias and Elisa Garcia-Gorriz and Adolf Stips},
  title = {Understanding the Causes of Recent Warming of Mediterranean Waters. 
           How Much Could Be Attributed to Climate Change?},
  journal = {PLOSone},
  volume = {8(11)},
  pages = {e81591},
  doi = {doi:10.1371/journal.pone.0081591},
  year = {2013}
}
@article{macias_etal_2014,
  author = {Diego Macias and Adolf Stips and Elisa Garcia-Gorriz},
  title = {The relevance of deep chlorophyll maximum in the open 
           Mediterranean Sea evaluated through 3D hydrodynamic-biogeochemical 
           coupled simulations},
  journal = {Ecological Modelling},
  volume = {281},
  pages = {26-37},
  doi = {doi:10.1016/j.ecolmodel.2014.03.002},
  year = {2014}
}
@article{moghimi_etal_2013,
  author = {Saeed Moghimi and Knut Klingbeil and Ulf Gr\"awe and Hans Burchard},
  title = {A direct comparison of a depth-dependent Radiation stress 
               formulation and a Vortex force formulation within a
               three-dimensional coastal ocean model},
  journal = {Ocean Modelling},
  volume = {70},
  pages = {132--144},
  year = {2013},
  doi = {10.1016/j.ocemod.2012.10.002}
}
@article{raudsepp_etal_2013,
  author = {Raudsepp, Urmas and Laanemets, Jaan and Maljutenko, Ilja and Hongisto, Marke and Jalkanen, Jukka-pekka},
  doi = {10.5697/oc.55-3.000},
  journal = {Oceanologia},
  number = {4},
  pages = {1--21},
  title = {{Impact of ship-borne nitrogen deposition on the Gulf of Finland ecosystem : an evaluation}},
  volume = {55},
  year = {2013}
}
@article{schernewski_etal_2012,
  author = {G. Schernewski and E. Fischer and T. Huttula and G. Jost
               and M. Ras},
  title = {Simulation tools to support bathing water quality management:
               {E}scherichia coli bacteria in a {B}altic lagoon},
  journal = {Journal of Coastal Conservation},
  volume = {16},
  pages = {473--488},
  year = {2012},
  doi = {10.1007/s11852-012-0202-7}
}
@article{burchard_schuttelaars_jpo_2012,
  author = {Hans Burchard and Henk M. Schuttelaars},
  title = {Analysis of tidal straining as driver for estuarine
               circulation in tidally energetic estuaries},
  journal = {Journal of Physical Oceanography},
  volume = {42},
  pages = {261-271},
  year = {2012}
}
@article{graewe_burchard_2012,
  author = {Ulf Gr\"awe and Hans Burchard},
  title = {Storm surges in the {W}estern {B}altic {S}ea:
               the present and a possible future},
  journal = {Climate Dynamics},
  volume = {39},
  pages = {165-183},
  year = {2012}
}
@article{rennau_etal_2012,
  author = {Hannes Rennau and Stefan Schimmels and Hans Burchard},
  title = {The impact of offshore wind farms on transport and dilution in 
               density-driven bottom currents: a numerical model study},
  journal = {Coastal Engineering},
  volume = {60},
  pages = {53-68},
  year = {2012}
}
@article{becherer_umlauf_2011,
  author = {Johannes Becherer and Lars Umlauf},
  title = {Boundary mixing in lakes. {P}art {I}. Modeling the effect of
               shear-induced convection},
  journal = {Journal of Geophyscal Research},
  year = {2011},
  volume = {116},
  doi = {doi:10.1029/2011JC007119}
}
@article{lorrai_etal_2011,
  author = {Claudia Lorrai and Lars Umlauf and Johannes Becherer and
               Alfred W\"uest},
  title = {Boundary mixing in lakes. {P}art {II}.
              {C}ombined effects of shear-induced and convective turbulence
              on basin-scale mixing},
  journal = {Journal of Geophyscal Research},
  volume = {116},
  year = {2011},
  doi = {doi:10.1029/2011JC007121}
}
@article{barth_etal_2011,
  author = {A. Barth and A. Alvera-Azcarate and J.-M. Beckers and 
               J. Staneva and E. V. Stanev and J. Schulz-Stellenfleth},
  title = {Correcting surface winds by assimilating {H}igh-{F}requency 
              {R}adar surface currents in the {G}erman {B}ight},
  journal = {Ocean Dynamics},
  volume = {599-610},
  year = {2011}
}
@article{buechmann_etal_odyn_2011,
  author = {Bjarne B\"uchmann and Carsten Hansen and Johan S\"oderkvist},
  title = {Improvement of hydrodynamic forecasting of {D}anish waters:
               impact of low-frequency {N}orth {A}tlantic barotropic variations},
  journal = {Ocean Dynamics},
  year = {2011},
  doi = {doi 10.1007/s10236-011-0451-2}
}
@article{burchard_etal_jpo_2011,
  author = {Hans Burchard and Robert D. Hetland and Elisabeth Schulz 
               and Henk M. Schuttelaars},
  title = {Drivers of residual circulation in tidally energetic estuaries: 
              {S}traight and irrotational estuaries with parabolic 
              cross-section},
  journal = {Journal of Physical Oceanography},
  volume = {41},
  pages = {548-570},
  year = {2011}
}
@article{hofmeister_etal_omod_2011,
  author = {Richard Hofmeister and Jean-Marie Beckers and Hans Burchard},
  title = {Realistic modelling of the exceptional inflows into the central 
               {B}altic {S}ea in 2003 using terrain-following coordinates},
  journal = {Ocean Modelling},
  volume = {39},
  pages = {233-247},
  year = {2011}
}
@article{barth_etal_osci_2010,
  author = {A. Barth and A. Alvera-Azcarate and K.-W. Gurgel and
               J. Staneva and A. Port and J.-M. Beckers and 
               E. V. Stanev},
  title = {Ensemble perturbation smoother for optimizing tidal boundary 
               conditions by assimilation of {H}igh-{F}requency {R}adar 
               surface currents - application to the {G}erman {B}ight},
  journal = {Ocean Science},
  volume = {6},
  pages = {161-178},
  year = {2010}
}
@article{hofmeister_etal_omod_2010,
  author = {Richard Hofmeister and Hans Burchard and Jean-Marie Beckers},
  title = {Non-uniform adaptive vertical grids for 3D numerical ocean 
               models},
  journal = {Ocean Modelling},
  volume = {33},
  pages = {70-86},
  year = {2010}
}
@article{umlauf_etal_jpo_2010,
  author = {Lars Umlauf and Lars Arneborg and Richard Hofmeister and 
               Hans Burchard},
  title = {Entrainment in shallow rotating gravity currents: a modelling 
               study},
  journal = {Journal of Physical Oceanography},
  volume = {40},
  pages = {1819-1834},
  year = {2010}
}
@article{burchard_etal_csr_2009,
  author = {Hans Burchard and Frank Janssen and Karsten Bolding and 
               Lars Umlauf and Hannes Rennau},
  title = {Model simulations of dense bottom currents
               in the {W}estern {B}altic {S}ea},
  journal = {Continental Shelf Research},
  volume = {29},
  pages = {205-220},
  year = {2009}
}
@article{fischer_etal_odyn_2009,
  author = {Elisabeth Fischer and Robert D. Hetland and Hans Burchard},
  title = {Numerical investigations of the turbulent kinetic energy 
               dissipaption rate in the {R}hine region of freshwater influence},
  journal = {Ocean Dynamics},
  volume = {59},
  pages = {629-641},
  year = {2009},
  doi = {10.1007/s10236-009-0187-4}
}
@article{graewe_wolff_efm_2009,
  author = {Ulf Gr\"awe and J\"org-Olaf Wolff},
  title = {Suspended particulate matter dynamics in a particle framework},
  journal = {Environmental Fluid Mechanics},
  volume = {10},
  number = {},
  pages = {21-39},
  year = {2009},
  issn = {1567-7419},
  doi = {10.1007/s10652-009-9141-8}
}
@article{hofmeister_etal_csr_2009,
  author = {Richard Hofmeister and Hans Burchard and Karsten Bolding},
  title = {A three-dimensional study on processes of stratification and 
               de-stratification in the {L}imfjord},
  journal = {Continental Shelf Research},
  volume = {29},
  pages = {1515-1524},
  year = {2009}
}
@article{holtermann_etal_csr_2009,
  author = {Peter Holtermann and Hans Burchard and Tim Jennerjahn},
  title = {Hydrodynamics of the {S}egara {A}nakan {L}agoon},
  journal = {Regional Environmental Change},
  volume = {9},
  pages = {245-258},
  year = {2009}
}
@article{lettmann_etal_odyn_2009,
  author = {Karsten Lettmann and J\"org-Olaf Wolff and Thomas H. Badewien},
  title = {Modelling the impact of wind and
            waves on suspended particulate matter fluxes in the East Frisian Wadden Sea
            (southern North Sea)},
  journal = {Ocean Dynamics},
  volume = {59},
  number = {2},
  pages = {239--262},
  year = {2009},
  issn = {1616-7341},
  doi = {10.1007/s10236-009-0194-5}
}
@article{reissmann_etal_pio_2009,
  author = {Jan Hinrich Reissmann and Hans Burchard and Rainer Feistel and
               Eberhard Hagen and Hans Ulrich Lass and Volker Mohrholz and
               G\"unther Nausch and Lars Umlauf and Gunda Wieczorek},
  title = {State-of-the-art review on {B}altic mixing and consequences for
               eutrophication},
  journal = {Progress in Oceanography},
  volume = {82},
  pages = {47-80},
  year = {2009}
}
@article{rennau_burchard_od_2009,
  author = {Hannes Rennau and Hans Burchard},
  title = {Quantitative analysis of numerically induced mixing in a 
               coastal model application},
  journal = {Ocean Dynamics},
  volume = {59},
  pages = {671-687},
  year = {2009}
}
@article{staneva_etal_csr_2009,
  author = {Joanna Staneva and Emil Stanev and J\"org-Olaf Wolff and
               Thomas H. Badewein and Reiner Reuter and Burghard Flemming and 
               Alexander Bartholom\"a and Karsten Bolding},
  title = {{H}ydrodynamics and Sediment Dynamics in the {G}erman 
	       {B}ight. {A} Focus on Observations and Numerical 
	       Modelling in the {E}ast {F}risian {W}adden {S}ea},
  journal = {Continental Shelf Research},
  volume = {29},
  pages = {302-319},
  year = {2009}
}
@article{burchard_etal_jpo_2008,
  author = {Hans Burchard and G\"otz Fl\"oser and Joanna V. Staneva and
               Thomas H. Badewien and Rolf Riethm\"uller},
  title = {Impact of density gradients on net sediment transport
               into the {W}adden {S}ea},
  journal = {Journal of Physical Oceanography},
  volume = {38},
  pages = {566-587},
  year = {2008},
  doi = {10.1175/2007JPO3796.1}
}
@article{burchard_hofmeister_eccs_2008,
  author = {Hans Burchard and Richard Hofmeister},
  title = {A dynamic equation for the potential 
	       energy anomaly for analysing mixing and
               stratification in estuaries and coastal seas},
  journal = {Estuarine, Coastal and Shelf Science},
  volume = {77},
  pages = {679-687},
  year = {2008}
}
@article{burchard_rennau_om_2008,
  author = {Hans Burchard and Hannes Rennau},
  title = {Comparative quantification of physically and
               numerically induced mixing in ocean models},
  journal = {Ocean Modelling},
  volume = {20},
  pages = {293-311},
  year = {2008}
}
@article{lilover_stips_jms_2008,
  author = {M.-J. Lilover and A. Stips},
  title = {The variability of parameters controlling the cyanobacteria 
             bloom biomass in the {B}altic {S}ea},
  journal = {Journal of Marine Sysystems},
  volume = {74},
  year = {2008},
  pages = {108-115}
}
@article{banas_etal_meps_2007,
  author = {N. S. Banas and B. M. Hickey and J. A. Newton and J. L. Ruesink},
  title = {Tidal exchange, bivalve grazing, and patterns of
               primary production in {Willapa} {Bay}, {W}ashington, {USA}},
  journal = {Marine Ecology Progress Series},
  volume = {341},
  pages = {123-139},
  year = {2007}
}
@article{stanev_etal_csr_2007,
  author = {Emil V. Stanev and B. W. Flemming and A. Bartholom\"a and
               J. V. Staneva and J\"org-Olaf Wolff},
  title = {Vertical circulation in shallow tidal inlets and back-barrier
               basins},
  journal = {Continental Shelf Research},
  volume = {27},
  pages = {798-331},
  year = {2007}
}
@article{stanev_etal_jgr_2007,
  author = {Emil V. Stanev and  Gerold Brink-Spalink and J\"org-Olaf Wolff},
  title = {Sediment dynamics in tidally dominated environments controlled
               by transport and turbulence. {A} case study for the {E}ast
              {F}risian {W}adden {S}ea},
  journal = {Journal of Geophyscal Research},
  year = {2007},
  volume = {112},
  doi = {doi:10.1029/2005JC003045}
}
@article{stanev_etal_od_2006,
  author = {Emil V. Stanev and J\"org-Olaf Wolff and Gerold Brink-Spalink},
  title = {On the sensitivity of the sedimentary system in the
              {E}ast {F}risian {W}adden {S}ea to sea-level rise
              and wave-induced bed shear stress},
  journal = {Ocean Dynamics},
  volume = {56},
  pages = {266-283},
  year = {2006}
}
@article{banas_nickey_jrg_2005,
  author = {Niel S. Banas and Barbara M. Hickey},
  title = {Mapping exchange and residence time in a model of Willapa 
	       Bay, Washington, a branching, macrotidal estuary},
  journal = {Journal of Geophyscal Research},
  volume = {110},
  pages = {C11011},
  year = {2005}
}
@article{burchard_etal_od_2005,
  author = {Hans Burchard and H.U. Lass and V. Mohrholz and L. Umlauf
               and J. Sellschopp and V. Fiekas and K. Bolding and and
               L. Arneborg},
  title = {Dynamics of medium-intensity dense water plumes in the
               {A}rkona {S}ea, {W}estern {B}altic {S}ea},
  journal = {Ocean Dynamics},
  volume = {55},
  pages = {391-402},
  year = {2005}
}
@article{umlauf_lemmin_lo_2005,
  author = {Lars Umlauf and Ulrich Lemmin},
  title = {Inter-basin exchange and mixing in the
               hypolimnion of a large lake: the role of long internal waves},
  journal = {Limnology and Oceanography},
  volume = {50},
  pages = {1601-1611},
  year = {2005}
}
@article{burchard_etal_od_2004,
  author = {Hans Burchard and Karsten Bolding and Manuel Ruiz Villarreal},
  title = {Three-dimensional modelling of estuarine turbidity maxima 
		in a tidal estuary},
  journal = {Ocean Dynamics},
  volume = 54,
  pages = {250-265},
  year = {2004}
}
@article{stips_etal_od_2004,
  author = {Adolf Stips and Karsten Bolding and Thomas Pohlman and 
		Hans Burchard},
  title = {Simulating the temporal and spatial dynamics of the 
                {N}orth {S}ea using the new model GETM ({G}eneral {E}stuarine
		{T}ransport {M}odel)},
  journal = {Ocean Dynamics},
  volume = 54,
  pages = {266-283},
  year = {2004},
  doi = {10.1007/s10236-003-0077-0}
}
@article{stanev_etal_od_2003a,
  author = {Emil V. Stanev and J\"org-Olaf Wolff and Hans Burchard and 
                Karsten Bolding and G. Fl\"oser},
  title = {On the Circulation in the East Frisian Wadden Sea:
                {N}umerical modeling and data analysis},
  journal = {Ocean Dynamics},
  volume = 52,
  pages = {153-168},
  year = {2003}
}
@article{stanev_etal_od_2003b,
  author = {Emil V. Stanev and G\"otz Fl\"oser and J\"org-Olaf Wolff},
  title = {Dynamical control on water exchanges between
               tidal basins and the open sea. {A} case study
               for the {E}ast {F}risian {W}adden {S}ea},
  journal = {Ocean Dynamics},
  volume = {53},
  pages = {146-165},
  year = {2003}
}
@article{mathieu_etal_csr_2002,
  author = {Pierre-Philippe Mathieu and  Eric Deleersnijder and
               Ben\^oit Cushman-Roisin and Jean-Marie Beckers and Karsten
               Bolding},
  title = {The role of topography in small well-mixed bays,
               with application to the lagoon of {M}ururoa},
  journal = {Continental Shelf Research},
  volume = {22},
  pages = {1379-1395},
  year = {2002}
}
@article{burchard_apm_1999,
  author = {Hans Burchard},
  title = {Recalculation of surface slopes as forcing for numerical
               water column models of tidal flow},
  journal = {Applied Mathematical Modelling},
  volume = {23},
  pages = {737-755},
  year = {1999}
}

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